IL_1S72_071

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CGUAGUACCUUG*CUUG

Length

16 nucleotides

Bulged bases

1S72|1|0|G|1979, 1S72|1|0|U|1985, 1S72|1|0|U|2004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02897.1

Basepair signature

cWW-L-R-cWW-L-L-tSW-L-cWW

Number of instances in this motif group

1

Unit IDs

1S72|1|0|C|1975
1S72|1|0|G|1976
1S72|1|0|U|1977
1S72|1|0|A|1978
1S72|1|0|G|1979
1S72|1|0|U|1980
1S72|1|0|A|1981
1S72|1|0|C|1982
1S72|1|0|C|1983
1S72|1|0|U|1984
1S72|1|0|U|1985
1S72|1|0|G|1986
*
1S72|1|0|C|2002
1S72|1|0|U|2003
1S72|1|0|U|2004
1S72|1|0|G|2005

Current chains

Chain 0

23S ribosomal RNA

Nearby chains