Motif IL_02897.1 Version IL_02897.1 of this group appears in releases 1.5 to 1.18
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 1-13 | 3-9 | 6-7 | 6-8 | 10-11 | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_1S72_071 | 1S72 | 0 | 3 | 0 | LSU rRNA | C | 1975 | G | 1976 | U | 1977 | A | 1978 | U | 1980 | A | 1981 | C | 1982 | C | 1983 | U | 1984 | G | 1986 | * | C | 2002 | U | 2003 | G | 2005 | cWW | cwW | ncSH | ntSW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CGUAGUACCUUG*CUUG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GUAGUACCUU*UU | 1 |
Release history
Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.17 | 1.18 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 | 2014-09-04 | 2014-10-07 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
Parent motif | Common motif instances | Only in IL_02897.1 | Only in the parent motif |
---|---|---|---|
IL_89028.5 Compare | IL_1S72_071 | IL_2QBG_077, IL_4A1B_092 |
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-cWW-L-L-tSW-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: