3D structure

PDB id
1S72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
Experimental method
X-RAY DIFFRACTION
Resolution
2.4 Å

Loop

Sequence
UUC*GUGAG
Length
8 nucleotides
Bulged bases
1S72|1|0|G|2611, 1S72|1|0|A|2612
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_93635.1
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
13

Unit IDs

1S72|1|0|U|2545
1S72|1|0|U|2546
1S72|1|0|C|2547
*
1S72|1|0|G|2609
1S72|1|0|U|2610
1S72|1|0|G|2611
1S72|1|0|A|2612
1S72|1|0|G|2613

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L3P
Chain K
50S ribosomal protein L14P

Coloring options:

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