IL_1S72_089

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CUGAC*GGAAAAGAG

Length

14 nucleotides

Bulged bases

1S72|1|0|G|2815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_64847.2

Basepair signature

cWW-tWH-tSH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

1S72|1|0|C|2672
1S72|1|0|U|2673
1S72|1|0|G|2674
1S72|1|0|A|2675
1S72|1|0|C|2676
*
1S72|1|0|G|2809
1S72|1|0|G|2810
1S72|1|0|A|2811
1S72|1|0|A|2812
1S72|1|0|A|2813
1S72|1|0|A|2814
1S72|1|0|G|2815
1S72|1|0|A|2816
1S72|1|0|G|2817

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain J

50S ribosomal protein L13P