IL_1S72_094

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GGUAAG*CGAAAC

Length

12 nucleotides

Bulged bases

1S72|1|0|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92122.2

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

10

Unit IDs

1S72|1|0|G|2772
1S72|1|0|G|2773
1S72|1|0|U|2774
1S72|1|0|A|2775
1S72|1|0|A|2776
1S72|1|0|G|2777
*
1S72|1|0|C|2797
1S72|1|0|G|2798
1S72|1|0|A|2799
1S72|1|0|A|2800
1S72|1|0|A|2801
1S72|1|0|C|2802

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L6P

Chain J

50S ribosomal protein L13P