IL_1T0K_001
3D structure
- PDB id
- 1T0K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Joint X-ray and NMR Refinement of Yeast L30e-mRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.24 Å
Loop
- Sequence
- CGGAG*CAGAGAUG
- Length
- 13 nucleotides
- Bulged bases
- 1T0K|1|D|A|57
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.1
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
1T0K|1|C|C|9
1T0K|1|C|G|10
1T0K|1|C|G|11
1T0K|1|C|A|12
1T0K|1|C|G|13
*
1T0K|1|D|C|54
1T0K|1|D|A|55
1T0K|1|D|G|56
1T0K|1|D|A|57
1T0K|1|D|G|58
1T0K|1|D|A|59
1T0K|1|D|U|60
1T0K|1|D|G|61
Current chains
- Chain C
- 5'-R(*GP*AP*CP*CP*GP*GP*AP*GP*UP*GP*UP*CP*C)-3'
- Chain D
- 5'-R(*G*GP*AP*CP*GP*CP*AP*GP*AP*GP*AP*UP*GP*GP*UP*C)-3'
Nearby chains
- Chain B
- 60S ribosomal protein L30
Coloring options: