IL_1U6B_010

3D structure

PDB id

1U6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AG*UAU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Basepair outside cWW, intercalation pocket

Broad Annotation

No text annotation

Motif group

IL_99483.1

Basepair signature

cWW-cWW

Number of instances in this motif group

17

Unit IDs

1U6B|1|B|A|150
1U6B|1|B|G|151
*
1U6B|1|B|U|160
1U6B|1|B|A|161
1U6B|1|B|U|162

Current chains

Chain B

197-MER

Nearby chains