IL_1U9S_002

3D structure

PDB id

1U9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the specificity domain of Ribonuclease P of the A-type

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAAAG*CC

Length

7 nucleotides

Bulged bases

1U9S|1|A|A|113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Major groove outside cWW, minor groove, intercalation pocket

Broad Annotation

Major groove outside cWW, minor groove, intercalation pocket

Motif group

IL_88739.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

11

Unit IDs

1U9S|1|A|G|111
1U9S|1|A|A|112
1U9S|1|A|A|113
1U9S|1|A|A|114
1U9S|1|A|G|115
*
1U9S|1|A|C|228
1U9S|1|A|C|229

Current chains

Chain A

RIBONUCLEASE P

Nearby chains