IL_1U9S_006

3D structure

PDB id

1U9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the specificity domain of Ribonuclease P of the A-type

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GG*UGC

Length

5 nucleotides

Bulged bases

1U9S|1|A|G|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Major groove intercalation

Broad Annotation

Major groove intercalation

Motif group

IL_00225.11

Basepair signature

cWW-L-cWW

Number of instances in this motif group

46

Unit IDs

1U9S|1|A|G|140
1U9S|1|A|G|141
*
1U9S|1|A|U|158
1U9S|1|A|G|159
1U9S|1|A|C|160

Current chains

Chain A

RIBONUCLEASE P

Nearby chains