IL_1UN6_001

3D structure

PDB id

1UN6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUG*CAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CUG,CAG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1UN6_001 not in the Motif Atlas

Geometric match to IL_4WF9_042

Geometric discrepancy: 0.1746

The information below is about IL_4WF9_042

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

1UN6|1|E|C|68
1UN6|1|E|U|69
1UN6|1|E|G|70
*
1UN6|1|E|C|105
1UN6|1|E|A|106
1UN6|1|E|G|107

Current chains

Chain E

5S RIBOSOMAL RNA

Nearby chains

Chain C

TRANSCRIPTION FACTOR IIIA