1UN6 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1UN6_001 | 1/E/15:64 | UNCG | geometric HL_6QN3_003 HL_34617.5 | |
| HL_1UN6_002 | 1/E/82:94 | GNRA with GA tSW pair | geometric HL_5DDO_003 HL_37824.7 | |
| HL_1UN6_003 | 1/F/15:64 | UNCG HL_34617.5 | ||
| HL_1UN6_004 | 1/F/82:94 | GNRA HL_37824.7 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1UN6_002 | 1/E/72:78, 1/E/98:103 | 7x6 Sarcin-Ricin with UU cWW pair; G-bulge | geometric IL_1UN6_004 IL_24254.1 | |
| IL_1UN6_003 | 1/E/79:82, 1/E/94:97 | Tandem non-canonical cWW pairs | geometric IL_1JID_002 IL_85033.2 | |
| IL_1UN6_004 | 1/F/72:78, 1/F/98:103 | 7x6 Sarcin-Ricin with UU cWW pair; G-bulge IL_24254.1 | ||
| IL_1UN6_005 | 1/F/79:81, 1/F/95:97 | Isolated non-canonical cWW pair IL_87907.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1UN6_001 | Isolated non-canonical cWW pair |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_1UN6_004 | 1/E/9:14, 1/E/65:66, 1/E/109:110 | No text annotation | geometric J3_1UN6_002 J3_12003.2 | |
| J3_1UN6_002 | 1/F/9:14, 1/F/65:66, 1/F/109:110 | No text annotation J3_12003.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_1UN6_003 | No text annotation | ||
| J3_1UN6_001 | No text annotation |
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