3D structure

PDB id
1UN6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
UUAGUAC*GGAAUA
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
7x6 Sarcin-Ricin with UU cWW pair; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_16458.2
Basepair signature
cWW-L-R-L-R-cSH-tWH-tHS-cWW
Number of instances in this motif group
7

Unit IDs

1UN6|1|F|U|72
1UN6|1|F|U|73
1UN6|1|F|A|74
1UN6|1|F|G|75
1UN6|1|F|U|76
1UN6|1|F|A|77
1UN6|1|F|C|78
*
1UN6|1|F|G|98
1UN6|1|F|G|99
1UN6|1|F|A|100
1UN6|1|F|A|101
1UN6|1|F|U|102
1UN6|1|F|A|103

Current chains

Chain F
5S RIBOSOMAL RNA

Nearby chains

Chain B
TRANSCRIPTION FACTOR IIIA
Chain C
TRANSCRIPTION FACTOR IIIA
Chain D
TRANSCRIPTION FACTOR IIIA

Coloring options:

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