IL_1VVJ_046
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1VVJ_046 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.0982
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
1VVJ|1|QA|U|1247
1VVJ|1|QA|A|1248
1VVJ|1|QA|C|1249
1VVJ|1|QA|A|1250
1VVJ|1|QA|A|1251
1VVJ|1|QA|A|1252
1VVJ|1|QA|G|1253
*
1VVJ|1|QA|C|1284
1VVJ|1|QA|A|1285
1VVJ|1|QA|A|1286
1VVJ|1|QA|A|1287
1VVJ|1|QA|A|1288
1VVJ|1|QA|A|1289
1VVJ|1|QA|G|1290
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QG
- 30S ribosomal protein S7
- Chain QI
- 30S ribosomal protein S9
- Chain QJ
- 30S ribosomal protein S10
- Chain QN
- 30S ribosomal protein S14
- Chain QU
- 30S ribosomal protein S21
Coloring options: