IL_1VVJ_075
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- UUAAG*CGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1VVJ_075 not in the Motif Atlas
- Homologous match to IL_4WF9_019
- Geometric discrepancy: 0.1295
- The information below is about IL_4WF9_019
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
1VVJ|1|RA|U|606
1VVJ|1|RA|U|607
1VVJ|1|RA|A|608
1VVJ|1|RA|A|609
1VVJ|1|RA|G|609|||A
*
1VVJ|1|RA|C|618|||A
1VVJ|1|RA|G|619
1VVJ|1|RA|G|620
1VVJ|1|RA|A|621
1VVJ|1|RA|G|622
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RF
- 50S ribosomal protein L4
- Chain RP
- 50S ribosomal protein L15
Coloring options: