IL_1VVJ_125
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 1VVJ|1|RA|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1VVJ_125 not in the Motif Atlas
- Homologous match to IL_7RQB_067
- Geometric discrepancy: 0.1024
- The information below is about IL_7RQB_067
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76273.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 14
Unit IDs
1VVJ|1|RA|A|1669
1VVJ|1|RA|C|1670
1VVJ|1|RA|U|1671
1VVJ|1|RA|C|1672
1VVJ|1|RA|U|1673
1VVJ|1|RA|G|1674
*
1VVJ|1|RA|C|1990
1VVJ|1|RA|U|1991
1VVJ|1|RA|G|1992
1VVJ|1|RA|U|1993
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RE
- 50S ribosomal protein L3
- Chain RO
- 50S ribosomal protein L14
Coloring options: