IL_1VVJ_137
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- ACGA*UCUAU
- Length
- 9 nucleotides
- Bulged bases
- 1VVJ|1|RA|C|2055, 1VVJ|1|RA|C|2612, 1VVJ|1|RA|U|2613, 1VVJ|1|RA|A|2614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1VVJ_137 not in the Motif Atlas
- Homologous match to IL_7RQB_079
- Geometric discrepancy: 0.1319
- The information below is about IL_7RQB_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01206.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
1VVJ|1|RA|A|2054
1VVJ|1|RA|C|2055
1VVJ|1|RA|G|2056
1VVJ|1|RA|A|2057
*
1VVJ|1|RA|U|2611
1VVJ|1|RA|C|2612
1VVJ|1|RA|U|2613
1VVJ|1|RA|A|2614
1VVJ|1|RA|U|2615
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R5
- 50S ribosomal protein L33
- Chain RE
- 50S ribosomal protein L3
- Chain RW
- 50S ribosomal protein L22
Coloring options: