IL_1VVJ_264
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 1VVJ|1|YA|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1VVJ_264 not in the Motif Atlas
- Homologous match to IL_7RQB_036
- Geometric discrepancy: 0.0895
- The information below is about IL_7RQB_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
1VVJ|1|YA|C|998
1VVJ|1|YA|U|999
1VVJ|1|YA|A|1000
1VVJ|1|YA|A|1001
1VVJ|1|YA|G|1002
*
1VVJ|1|YA|C|1153
1VVJ|1|YA|G|1154
1VVJ|1|YA|A|1155
1VVJ|1|YA|A|1156
1VVJ|1|YA|G|1157
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y3
- 50S ribosomal protein L30
- Chain YB
- 5S ribosomal RNA; 5S rRNA
- Chain YU
- 50S ribosomal protein L20
- Chain YV
- 50S ribosomal protein L21
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