IL_89002.2

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4		5	break		6		7		8		9	1-9	2-8	3-7	4-7	5-6
1	IL_7A0S_051	7A0S	0.4599	1	UAA/GAN variation	X	LSU rRNA	C	1593	U	1594	A	1595	A	1596	A	1597	*	U	1431	G	1432	A	1433	G	1435		ntWH			cWW
2	IL_8C3A_051	8C3A	0.0000	1	UAA/GAN	1	LSU rRNA	U	1163	U	1164	A	1165	A	1166	A	1167	*	U	1324	U	1325	A	1326	A	1328	cWW	tWH	ntHW		cWW
3	IL_5TBW_048	5TBW	0.1006	1	UAA/GAN	1	LSU rRNA	U	1167	U	1168	A	1169	A	1170	G	1171	*	C	1328	U	1329	A	1330	A	1332	cWW	tWH	ntHW		cWW
4	IL_8C3A_129	8C3A	0.2054	1	UAA/GAN	1	LSU rRNA	A	3075	U	3076	U	3077	A	3078	U	3079	*	A	3099	G	3100	A	3101	U	3103	cWW	tWH		tHS	cWW
5	IL_5TBW_120	5TBW	0.2345	1	UAA/GAN	1	LSU rRNA	A	3103	U	3104	U	3105	A	3106	U	3107	*	A	3127	G	3128	A	3129	U	3131	cWW	tWH		tHS	cWW
6	IL_4V9F_037	4V9F	0.2200	1	UAA/GAN	0	LSU rRNA	U	1095	U	1096	A	1097	A	1098	G	1099	*	C	1257	G	1258	A	1259	A	1261	cWW	tWH		tHS	cWW
7	IL_7RQB_036	7RQB	0.1996	1	UAA/GAN	1A	LSU rRNA	C	998	U	999	A	1000	A	1001	G	1002	*	C	1153	G	1154	A	1155	G	1157	cWW	tWH		tHS	cWW
8	IL_4WF9_036	4WF9	0.1891	1	UAA/GAN	X	LSU rRNA	C	1042	U	1043	A	1044	A	1045	G	1046	*	C	1197	G	1198	A	1199	G	1201	cWW	tWH		tHS	cWW
9	IL_5J7L_277	5J7L	0.1922	1	UAA/GAN	DA	LSU rRNA	C	998	U	999	A	1000	A	1001	G	1002	*	C	1153	G	1154	A	1155	G	1157	cWW	tWH		tHS	cWW
10	IL_7A0S_033	7A0S	0.1901	1	UAA/GAN	X	LSU rRNA	C	1009	U	1010	A	1011	A	1012	G	1013	*	C	1164	G	1165	A	1166	G	1168	cWW	tWH		tHS	cWW
11	IL_8C3A_067	8C3A	0.3403	2	UAA/GAN	1	LSU rRNA	C	1528	U	1529	A	1530	A	1531	G	1532	*	C	1581	G	1582	A	1583	G	1586	cWW	tWH		tHS	cWW
12	IL_5TBW_063	5TBW	0.3673	2	UAA/GAN	1	LSU rRNA	C	1532	U	1533	A	1534	A	1535	G	1536	*	C	1585	G	1586	A	1587	G	1590	cWW	tWH		tHS	cWW
13	IL_4V9F_052	4V9F	0.3590	3	UAA/GAN	0	LSU rRNA	C	1456	U	1457	A	1458	A	1459	G	1460	*	C	1483	G	1484	A	1485	G	1489	cWW	tWH		tHS	cWW
14	IL_7RQB_052	7RQB	0.2871	1	UAA/GAN	1A	LSU rRNA	C	1351	U	1352	A	1353	A	1354	G	1355	*	C	1376	G	1377	A	1378	G	1380	cWW	tWH		tHS	cWW
15	IL_5J7L_295	5J7L	0.2673	1	UAA/GAN	DA	LSU rRNA	C	1577	U	1578	A	1579	A	1580	G	1581	*	C	1417	G	1418	A	1419	G	1421	cWW	tWH		tHS	cWW
16	IL_7RQB_055	7RQB	0.2737	1	UAA/GAN	1A	LSU rRNA	C	1577	U	1578	A	1579	A	1580	G	1581	*	C	1417	G	1418	A	1419	G	1421	cWW	tWH		tHS	cWW
17	IL_5J7L_292	5J7L	0.6734	1	UAA/GAN	DA	LSU rRNA	C	1351	U	1352	A	1353	A	1354	G	1355	*	C	1376	G	1377	A	1378	G	1380	cWW	tWH		tHS	cWW
18	IL_7A0S_048	7A0S	0.7000	1	UAA/GAN	X	LSU rRNA	C	1364	U	1365	A	1366	A	1367	G	1368	*	C	1389	G	1390	A	1391	G	1393	cWW	tWH		tHS	cWW
19	IL_4WF9_051	4WF9	0.6521	1	UAA/GAN	X	LSU rRNA	C	1388	U	1389	A	1390	A	1391	G	1392	*	C	1413	G	1414	A	1415	G	1417	cWW	ntWH		tHS	cWW
20	IL_3OXE_004	3OXE	0.7851	2	UAA/GAN related	A	domain II of glycine riboswitch	G	38	C	39	A	40	A	41	G	42	*	U	61	G	62	A	63	C	66	cWW			tHS	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CUAAG*CGAAG	6
CUAAG*CGAUG	4
AUUAU*AGAAU	2
CUAAG*CGAAAG	2
CUAAA*UGAUG	1
UUAAA*UUAUA	1
UUAAG*CUAUA	1
UUAAG*CGAGA	1
CUAAG*CGAAAUG	1
GCAAG*UGAAAC	1

Non-Watson-Crick part of the motif

Sequence	Counts
UAA*GAA	6
UAA*GAU	5
UAA*UAU	2
UUA*GAA	2
UAA*GAAA	2
UAA*GAG	1
UAA*GAAAU	1
CAA*GAAA	1

Release history

Release	3.80	3.81	3.82	3.83	3.84	3.85	3.86
Date	2024-01-31	2024-02-28	2024-03-27	2024-04-24	2024-05-22	2024-06-19	2024-07-17
Status	Updated, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Motif IL_89002.2 Version IL_89002.2 of this group appears in releases 3.80 to 3.86 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_89002.2 Version IL_89002.2 of this group appears in releases 3.80 to 3.86

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Csv

Json