IL_1VW3_025

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGGUAC*GAAAUA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37481.1

Basepair signature

cWW-L-R-R-cSH-tWH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

1VW3|1|A|U|780
1VW3|1|A|G|781
1VW3|1|A|G|782
1VW3|1|A|U|783
1VW3|1|A|A|784
1VW3|1|A|C|785
*
1VW3|1|A|G|841
1VW3|1|A|A|842
1VW3|1|A|A|843
1VW3|1|A|A|844
1VW3|1|A|U|845
1VW3|1|A|A|846

Current chains

Chain A

21S ribosomal RNA

Nearby chains