Motif IL_37481.1 Version IL_37481.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-4 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1VW3_025 | 1VW3 | 0.0000 | 0 | A | 21S ribosomal RNA | U | 780 | G | 781 | G | 782 | U | 783 | A | 784 | C | 785 | * | G | 841 | A | 842 | A | 843 | A | 844 | U | 845 | A | 846 | cWW | cWB | cSH | tWH | tHS | cWW |
| 2 | IL_4W21_065 | 4W21 | 0.1541 | 0 | 5 | 28S ribosomal RNA | C | 1732 | G | 1733 | G | 1734 | U | 1735 | A | 1736 | A | 1737 | * | U | 1792 | A | 1793 | A | 1794 | A | 1795 | U | 1796 | G | 1797 | cWW | ncWB | cSH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGGUAC*GAAAUA | 1 |
| CGGUAA*UAAAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGUA*AAAU | 2 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_37481.1 | Only in the parent motif |
|---|---|---|---|
| IL_41027.1 Compare | IL_1VW3_025 | IL_4W21_065 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-R-cSH-tWH-tHS-cWW
- Heat map statistics
- Min 0.15 | Avg 0.08 | Max 0.15
Coloring options: