IL_1VW3_038

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUGAGUAA*UGAAAUU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85647.7

Basepair signature

cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

25

Unit IDs

1VW3|1|A|A|1295
1VW3|1|A|U|1296
1VW3|1|A|G|1297
1VW3|1|A|A|1298
1VW3|1|A|G|1299
1VW3|1|A|U|1300
1VW3|1|A|A|1301
1VW3|1|A|A|1302
*
1VW3|1|A|U|1911
1VW3|1|A|G|1912
1VW3|1|A|A|1913
1VW3|1|A|A|1914
1VW3|1|A|A|1915
1VW3|1|A|U|1916
1VW3|1|A|U|1917

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain D

54S ribosomal protein YmL6, mitochondrial