IL_1VW3_042

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUUAAA*UAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99561.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

1VW3|1|A|A|1372
1VW3|1|A|U|1373
1VW3|1|A|U|1374
1VW3|1|A|A|1375
1VW3|1|A|A|1381
1VW3|1|A|A|1382
*
1VW3|1|A|U|1391
1VW3|1|A|A|1392
1VW3|1|A|U|1393
1VW3|1|A|U|1394

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial