IL_1VW3_046

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAUAAU*AGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_39212.2

Basepair signature

cWW-L-L-L-tHS-cWW

Number of instances in this motif group

8

Unit IDs

1VW3|1|A|G|1603
1VW3|1|A|A|1604
1VW3|1|A|U|1605
1VW3|1|A|A|1606
1VW3|1|A|A|1607
1VW3|1|A|U|1608
*
1VW3|1|A|A|1904
1VW3|1|A|G|1905
1VW3|1|A|C|1906

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

54S ribosomal protein L9, mitochondrial