3D structure

PDB id
1VW3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial large ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CAAAU*AUAAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_37976.1
Basepair signature
cWW-tSH-tHS-tHS-cWW
Number of instances in this motif group
44

Unit IDs

1VW3|1|A|C|2902
1VW3|1|A|A|2903
1VW3|1|A|A|2904
1VW3|1|A|A|2905
1VW3|1|A|U|2906
*
1VW3|1|A|A|3112
1VW3|1|A|U|3113
1VW3|1|A|A|3114
1VW3|1|A|A|3115
1VW3|1|A|G|3116

Current chains

Chain A
21S ribosomal RNA

Nearby chains

Chain C
54S ribosomal protein L9, mitochondrial

Coloring options:

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