IL_1VWW_033

3D structure

PDB id

1VWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUCGGGGGC*GCCGCCGUGGC

Length

20 nucleotides

Bulged bases

1VWW|1|5|G|1377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VWW|1|5|G|1355
1VWW|1|5|U|1356
1VWW|1|5|C|1357
1VWW|1|5|G|1358
1VWW|1|5|G|1359
1VWW|1|5|G|1360
1VWW|1|5|G|1361
1VWW|1|5|G|1362
1VWW|1|5|C|1363
*
1VWW|1|5|G|1374
1VWW|1|5|C|1375
1VWW|1|5|C|1376
1VWW|1|5|G|1377
1VWW|1|5|C|1378
1VWW|1|5|C|1379
1VWW|1|5|G|1380
1VWW|1|5|U|1381
1VWW|1|5|G|1382
1VWW|1|5|G|1383
1VWW|1|5|C|1384

Current chains

Chain 5

28S ribosomal RNA

Nearby chains