IL_1VWW_034

3D structure

PDB id

1VWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAUC*GCGCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81956.1

Basepair signature

cWW-cWW-cSS-cWW

Number of instances in this motif group

1

Unit IDs

1VWW|1|5|G|1425
1VWW|1|5|G|1426
1VWW|1|5|A|1427
1VWW|1|5|U|1428
1VWW|1|5|C|1429
*
1VWW|1|5|G|1455
1VWW|1|5|C|1456
1VWW|1|5|G|1457
1VWW|1|5|C|1458
1VWW|1|5|A|1459
1VWW|1|5|C|1460

Current chains

Chain 5

28S ribosomal RNA

Nearby chains