IL_1VWW_051

3D structure

PDB id

1VWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAUAGACAGCA*UGCCGAA

Length

18 nucleotides

Bulged bases

1VWW|1|5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VWW|1|5|U|1957
1VWW|1|5|A|1958
1VWW|1|5|U|1959
1VWW|1|5|A|1960
1VWW|1|5|G|1961
1VWW|1|5|A|1962
1VWW|1|5|C|1963
1VWW|1|5|A|1964
1VWW|1|5|G|1965
1VWW|1|5|C|1966
1VWW|1|5|A|1967
*
1VWW|1|5|U|2020
1VWW|1|5|G|2021
1VWW|1|5|C|2022
1VWW|1|5|C|2023
1VWW|1|5|G|2024
1VWW|1|5|A|2025
1VWW|1|5|A|2026

Current chains

Chain 5

28S ribosomal RNA

Nearby chains