IL_1VWW_085
3D structure
- PDB id
- 1VWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUAGU*GUGGGG
- Length
- 11 nucleotides
- Bulged bases
- 1VWW|1|5|G|4183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87168.1
- Basepair signature
- cWW-tSS-L-tSH-tSS-L-cSH-R-R-L-bif-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
1VWW|1|5|C|3926
1VWW|1|5|U|3927
1VWW|1|5|A|3928
1VWW|1|5|G|3929
1VWW|1|5|U|3930
*
1VWW|1|5|G|4180
1VWW|1|5|U|4181
1VWW|1|5|G|4182
1VWW|1|5|G|4183
1VWW|1|5|G|4184
1VWW|1|5|G|4185
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: