IL_1VWW_087
3D structure
- PDB id
- 1VWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAGCUCAG*CGUGGAGCAGAAGGGCAAAAGCUC
- Length
- 32 nucleotides
- Bulged bases
- 1VWW|1|5|A|4280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85707.1
- Basepair signature
- cWW-L-R-R-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
1VWW|1|5|G|4238
1VWW|1|5|A|4239
1VWW|1|5|G|4240
1VWW|1|5|C|4241
1VWW|1|5|U|4242
1VWW|1|5|C|4243
1VWW|1|5|A|4244
1VWW|1|5|G|4245
*
1VWW|1|5|C|4263
1VWW|1|5|G|4264
1VWW|1|5|U|4265
1VWW|1|5|G|4266
1VWW|1|5|G|4267
1VWW|1|5|A|4268
1VWW|1|5|G|4269
1VWW|1|5|C|4270
1VWW|1|5|A|4271
1VWW|1|5|G|4272
1VWW|1|5|A|4273
1VWW|1|5|A|4274
1VWW|1|5|G|4275
1VWW|1|5|G|4276
1VWW|1|5|G|4277
1VWW|1|5|C|4278
1VWW|1|5|A|4279
1VWW|1|5|A|4280
1VWW|1|5|A|4281
1VWW|1|5|A|4282
1VWW|1|5|G|4283
1VWW|1|5|C|4284
1VWW|1|5|U|4285
1VWW|1|5|C|4286
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA
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