IL_1VX2_089
3D structure
- PDB id
- 1VX2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UGGUU*AUUCCGA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74876.3
- Basepair signature
- cWW-tWH-L-R-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
1VX2|1|6|U|51
1VX2|1|6|G|52
1VX2|1|6|G|53
1VX2|1|6|U|54
1VX2|1|6|U|55
*
1VX2|1|6|A|58
1VX2|1|6|U|59
1VX2|1|6|U|60
1VX2|1|6|C|61
1VX2|1|6|C|62
1VX2|1|6|G|63
1VX2|1|6|A|64
Current chains
- Chain 6
- P/E tRNA
Nearby chains
No other chains within 10ÅColoring options: