IL_1VX2_104
3D structure
- PDB id
- 1VX2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 1VX2|1|2|U|1585, 1VX2|1|2|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1VX2|1|2|G|1541
1VX2|1|2|C|1542
1VX2|1|2|U|1543
1VX2|1|2|C|1544
1VX2|1|2|A|1545
1VX2|1|2|G|1546
1VX2|1|2|C|1547
1VX2|1|2|G|1548
1VX2|1|2|U|1549
1VX2|1|2|G|1550
*
1VX2|1|2|C|1582
1VX2|1|2|C|1583
1VX2|1|2|G|1584
1VX2|1|2|U|1585
1VX2|1|2|U|1586
1VX2|1|2|G|1587
1VX2|1|2|A|1588
1VX2|1|2|A|1589
1VX2|1|2|C|1590
1VX2|1|2|C|1591
1VX2|1|2|C|1592
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain D
- Ribosomal protein uS3
- Chain F
- Ribosomal protein uS7
- Chain Q
- Ribosomal protein uS9
- Chain T
- Ribosomal protein eS19
- Chain U
- Ribosomal protein uS10
- Chain d
- Ribosomal protein uS14
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