IL_1VY4_022
3D structure
- PDB id
- 1VY4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 1VY4|1|AA|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1VY4_022 not in the Motif Atlas
- Homologous match to IL_4LFB_022
- Geometric discrepancy: 0.0625
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.1
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
1VY4|1|AA|C|569
1VY4|1|AA|G|570
1VY4|1|AA|U|571
1VY4|1|AA|A|572
1VY4|1|AA|A|573
1VY4|1|AA|A|574
1VY4|1|AA|G|575
*
1VY4|1|AA|C|880
1VY4|1|AA|G|881
Current chains
- Chain AA
- 16S Ribosomal RNA
Nearby chains
- Chain AE
- 30S ribosomal protein S5
- Chain AL
- 30S ribosomal protein S12
- Chain AQ
- 30S ribosomal protein S17
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