IL_1VY4_159
3D structure
- PDB id
- 1VY4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- UUUCC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 1VY4|1|BA|U|2689, 1VY4|1|BA|C|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1VY4_159 not in the Motif Atlas
- Homologous match to IL_7RQB_105
- Geometric discrepancy: 0.0474
- The information below is about IL_7RQB_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08296.3
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
1VY4|1|BA|U|2687
1VY4|1|BA|U|2688
1VY4|1|BA|U|2689
1VY4|1|BA|C|2690
1VY4|1|BA|C|2691
*
1VY4|1|BA|G|2718
1VY4|1|BA|G|2719
1VY4|1|BA|U|2720
1VY4|1|BA|A|2721
1VY4|1|BA|G|2722
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain BE
- 50S ribosomal protein L3
- Chain BR
- 50S ribosomal protein L17
- Chain BT
- 50S ribosomal protein L19
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