IL_1VY5_191
3D structure
- PDB id
- 1VY5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 1VY5|1|CA|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1VY5_191 not in the Motif Atlas
- Homologous match to IL_4LFB_022
- Geometric discrepancy: 0.0762
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
1VY5|1|CA|C|569
1VY5|1|CA|G|570
1VY5|1|CA|U|571
1VY5|1|CA|A|572
1VY5|1|CA|A|573
1VY5|1|CA|A|574
1VY5|1|CA|G|575
*
1VY5|1|CA|C|880
1VY5|1|CA|G|881
Current chains
- Chain CA
- 16S Ribosomal RNA
Nearby chains
- Chain CE
- 30S ribosomal protein S5
- Chain CL
- 30S ribosomal protein S12
- Chain CQ
- 30S ribosomal protein S17
Coloring options: