IL_1W2B_062
3D structure
- PDB id
- 1W2B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Trigger Factor ribosome binding domain in complex with 50S
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- AUUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 1W2B|1|0|G|2033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1W2B_062 not in the Motif Atlas
- Geometric match to IL_4V9F_062
- Geometric discrepancy: 0.0946
- The information below is about IL_4V9F_062
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
1W2B|1|0|A|1747
1W2B|1|0|U|1748
1W2B|1|0|U|1749
1W2B|1|0|C|1750
1W2B|1|0|G|1751
1W2B|1|0|G|1752
*
1W2B|1|0|C|2031
1W2B|1|0|U|2032
1W2B|1|0|G|2033
1W2B|1|0|U|2034
Current chains
- Chain 0
- 23S RRNA
Nearby chains
- Chain B
- 50S RIBOSOMAL PROTEIN L3P
- Chain J
- 50S RIBOSOMAL PROTEIN L14P
Coloring options: