IL_1XNQ_039

3D structure

PDB id

1XNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Inosine-Adenine Wobble Base Pair Complex in the Context of the Decoding Center

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

CGG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1XNQ_039 not in the Motif Atlas

Geometric match to IL_3ICQ_003

Geometric discrepancy: 0.1376

The information below is about IL_3ICQ_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70707.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

70

Unit IDs

1XNQ|1|A|C|1008
1XNQ|1|A|G|1009
1XNQ|1|A|G|1010
*
1XNQ|1|A|C|1019
1XNQ|1|A|U|1020
1XNQ|1|A|G|1021

Current chains

Chain A

16S ribosomal RNA

Nearby chains