IL_1YJ9_018
3D structure
- PDB id
- 1YJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- ACGAAU*AGACU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1YJ9_018 not in the Motif Atlas
- Homologous match to IL_4V9F_018
- Geometric discrepancy: 0.0705
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_67427.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
1YJ9|1|0|A|562
1YJ9|1|0|C|563
1YJ9|1|0|G|564
1YJ9|1|0|A|565
1YJ9|1|0|A|566
1YJ9|1|0|U|567
*
1YJ9|1|0|A|591
1YJ9|1|0|G|592
1YJ9|1|0|A|593
1YJ9|1|0|C|594
1YJ9|1|0|U|595
Current chains
- Chain 0
- 23S Ribosomal RNA
Nearby chains
- Chain W
- 50S ribosomal protein L30P
- Chain Y
- 50S ribosomal protein L32E
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