3D structure

PDB id
1YJW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CUAAC*GGGAG
Length
10 nucleotides
Bulged bases (A, C, G, U)
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1YJW|1|0|C|663
1YJW|1|0|U|664
1YJW|1|0|A|665
1YJW|1|0|A|666
1YJW|1|0|C|667
*
1YJW|1|0|G|679
1YJW|1|0|G|680
1YJW|1|0|G|681
1YJW|1|0|A|682
1YJW|1|0|G|683

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain C
50S RIBOSOMAL PROTEIN L4E
Chain L
50S RIBOSOMAL PROTEIN L15P

Coloring options:

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