1YJW Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1YJW_001 | 1/0/55:64 | No text annotation Not in a motif group | ||
| HL_1YJW_002 | 1/0/83:91 | No text annotation Not in a motif group | ||
| HL_1YJW_003 | 1/0/118:122 | No text annotation Not in a motif group | ||
| HL_1YJW_005 | 1/0/136:142 | No text annotation Not in a motif group | ||
| HL_1YJW_006 | 1/0/164:171 | No text annotation Not in a motif group | ||
| HL_1YJW_007 | 1/0/195:201 | No text annotation Not in a motif group | ||
| HL_1YJW_008 | 1/0/217:223 | No text annotation Not in a motif group | ||
| HL_1YJW_009 | 1/0/252:257 | No text annotation Not in a motif group | ||
| HL_1YJW_010 | 1/0/312:319 | No text annotation Not in a motif group | ||
| HL_1YJW_011 | 1/0/326:330 | No text annotation Not in a motif group | ||
| HL_1YJW_012 | 1/0/334:342 | No text annotation Not in a motif group | ||
| HL_1YJW_013 | 1/0/390:399 | No text annotation Not in a motif group | ||
| HL_1YJW_014 | 1/0/416:424 | No text annotation Not in a motif group | ||
| HL_1YJW_015 | 1/0/468:473 | No text annotation Not in a motif group | ||
| HL_1YJW_016 | 1/0/493:499 | No text annotation Not in a motif group | ||
| HL_1YJW_017 | 1/0/576:581 | No text annotation Not in a motif group | ||
| HL_1YJW_018 | 1/0/623:632 | No text annotation Not in a motif group | ||
| HL_1YJW_019 | 1/0/670:676 | No text annotation Not in a motif group | ||
| HL_1YJW_020 | 1/0/690:695 | No text annotation Not in a motif group | ||
| HL_1YJW_022 | 1/0/733:738 | No text annotation Not in a motif group | ||
| HL_1YJW_023 | 1/0/804:809 | No text annotation Not in a motif group | ||
| HL_1YJW_024 | 1/0/837:846 | No text annotation Not in a motif group | ||
| HL_1YJW_025 | 1/0/872:878 | No text annotation Not in a motif group | ||
| HL_1YJW_026 | 1/0/919:924 | No text annotation Not in a motif group | ||
| HL_1YJW_028 | 1/0/1054:1060 | No text annotation Not in a motif group | ||
| HL_1YJW_029 | 1/0/1076:1083 | No text annotation Not in a motif group | ||
| HL_1YJW_032 | 1/0/1274:1282 | No text annotation Not in a motif group | ||
| HL_1YJW_033 | 1/0/1326:1331 | No text annotation Not in a motif group | ||
| HL_1YJW_034 | 1/0/1387:1395 | No text annotation Not in a motif group | ||
| HL_1YJW_035 | 1/0/1430:1436 | No text annotation Not in a motif group | ||
| HL_1YJW_036 | 1/0/1468:1474 | No text annotation Not in a motif group | ||
| HL_1YJW_037 | 1/0/1498:1507 | No text annotation Not in a motif group | ||
| HL_1YJW_039 | 1/0/1594:1600 | No text annotation Not in a motif group | ||
| HL_1YJW_040 | 1/0/1628:1633 | No text annotation Not in a motif group | ||
| HL_1YJW_041 | 1/0/1651:1655 | No text annotation Not in a motif group | ||
| HL_1YJW_042 | 1/0/1687:1694 | No text annotation Not in a motif group | ||
| HL_1YJW_043 | 1/0/1705:1713 | No text annotation Not in a motif group | ||
| HL_1YJW_044 | 1/0/1769:1774 | No text annotation Not in a motif group | ||
| HL_1YJW_045 | 1/0/1793:1799 | No text annotation Not in a motif group | ||
| HL_1YJW_046 | 1/0/1808:1812 | No text annotation Not in a motif group | ||
| HL_1YJW_047 | 1/0/1833:1843 | No text annotation Not in a motif group | ||
| HL_1YJW_048 | 1/0/1862:1867 | No text annotation Not in a motif group | ||
| HL_1YJW_049 | 1/0/1916:1923 | No text annotation Not in a motif group | ||
| HL_1YJW_051 | 1/0/1990:1998 | No text annotation Not in a motif group | ||
| HL_1YJW_052 | 1/0/2068:2077 | No text annotation Not in a motif group | ||
| HL_1YJW_054 | 1/0/2248:2253 | No text annotation Not in a motif group | ||
| HL_1YJW_055 | 1/0/2281:2289 | No text annotation Not in a motif group | ||
| HL_1YJW_056 | 1/0/2298:2310 | No text annotation Not in a motif group | ||
| HL_1YJW_058 | 1/0/2358:2365 | No text annotation Not in a motif group | ||
| HL_1YJW_059 | 1/0/2389:2399 | No text annotation Not in a motif group | ||
| HL_1YJW_060 | 1/0/2411:2416 | No text annotation Not in a motif group | ||
| HL_1YJW_061 | 1/0/2442:2450 | No text annotation Not in a motif group | ||
| HL_1YJW_062 | 1/0/2506:2514 | No text annotation Not in a motif group | ||
| HL_1YJW_063 | 1/0/2563:2570 | No text annotation Not in a motif group | ||
| HL_1YJW_064 | 1/0/2585:2593 | No text annotation Not in a motif group | ||
| HL_1YJW_065 | 1/0/2629:2634 | No text annotation Not in a motif group | ||
| HL_1YJW_066 | 1/0/2695:2700 | No text annotation Not in a motif group | ||
| HL_1YJW_067 | 1/0/2737:2742 | No text annotation Not in a motif group | ||
| HL_1YJW_068 | 1/0/2780:2794 | No text annotation Not in a motif group | ||
| HL_1YJW_069 | 1/0/2836:2844 | No text annotation Not in a motif group | ||
| HL_1YJW_070 | 1/0/2876:2881 | No text annotation Not in a motif group | ||
| HL_1YJW_071 | 1/9/37:43 | No text annotation Not in a motif group | ||
| HL_1YJW_072 | 1/9/89:94 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_1YJW_004 | No text annotation | ||
| HL_1YJW_021 | No text annotation | ||
| HL_1YJW_027 | No text annotation | ||
| HL_1YJW_038 | No text annotation | ||
| HL_1YJW_050 | No text annotation | ||
| HL_1YJW_053 | No text annotation | ||
| HL_1YJW_057 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1YJW_001 | 1/0/21:27, 1/0/516:522 | No text annotation Not in a motif group | ||
| IL_1YJW_002 | 1/0/33:34, 1/0/448:450 | No text annotation Not in a motif group | ||
| IL_1YJW_003 | 1/0/39:41, 1/0/440:443 | No text annotation Not in a motif group | ||
| IL_1YJW_004 | 1/0/77:81, 1/0/93:100 | No text annotation Not in a motif group | ||
| IL_1YJW_005 | 1/0/153:154, 1/0/182:184 | No text annotation Not in a motif group | ||
| IL_1YJW_006 | 1/0/158:164, 1/0/171:178 | No text annotation Not in a motif group | ||
| IL_1YJW_007 | 1/0/210:216, 1/0/224:229 | No text annotation Not in a motif group | ||
| IL_1YJW_008 | 1/0/245:248, 1/0/265:266 | No text annotation Not in a motif group | ||
| IL_1YJW_009 | 1/0/248:249, 1/0/260:265 | No text annotation Not in a motif group | ||
| IL_1YJW_010 | 1/0/274:275, 1/0/374:376 | No text annotation Not in a motif group | ||
| IL_1YJW_011 | 1/0/280:287, 1/0/365:369 | No text annotation Not in a motif group | ||
| IL_1YJW_012 | 1/0/290:296, 1/0/355:362 | No text annotation Not in a motif group | ||
| IL_1YJW_013 | 1/0/307:309, 1/0/322:323 | No text annotation Not in a motif group | ||
| IL_1YJW_014 | 1/0/487:491, 1/0/501:515 | No text annotation Not in a motif group | ||
| IL_1YJW_015 | 1/0/548:553, 1/0/606:608 | No text annotation Not in a motif group | ||
| IL_1YJW_016 | 1/0/554:555, 1/0/602:605 | No text annotation Not in a motif group | ||
| IL_1YJW_017 | 1/0/558:560, 1/0/597:599 | No text annotation Not in a motif group | ||
| IL_1YJW_018 | 1/0/562:567, 1/0/591:595 | No text annotation Not in a motif group | ||
| IL_1YJW_019 | 1/0/567:572, 1/0/585:591 | No text annotation Not in a motif group | ||
| IL_1YJW_020 | 1/0/663:667, 1/0/679:683 | No text annotation Not in a motif group | ||
| IL_1YJW_021 | 1/0/699:702, 1/0/726:727 | No text annotation Not in a motif group | ||
| IL_1YJW_022 | 1/0/705:709, 1/0/719:723 | No text annotation Not in a motif group | ||
| IL_1YJW_023 | 1/0/763:765, 1/0/899:901 | No text annotation Not in a motif group | ||
| IL_1YJW_024 | 1/0/765:769, 1/0/892:899 | No text annotation Not in a motif group | ||
| IL_1YJW_025 | 1/0/788:789, 1/0/856:858 | No text annotation Not in a motif group | ||
| IL_1YJW_026 | 1/0/793:794, 1/0/819:821 | No text annotation Not in a motif group | ||
| IL_1YJW_027 | 1/0/794:798, 1/0/815:819 | No text annotation Not in a motif group | ||
| IL_1YJW_028 | 1/0/830:833, 1/0/849:851 | No text annotation Not in a motif group | ||
| IL_1YJW_029 | 1/0/834:836, 1/0/847:848 | No text annotation Not in a motif group | ||
| IL_1YJW_030 | 1/0/868:870, 1/0/880:884 | No text annotation Not in a motif group | ||
| IL_1YJW_031 | 1/0/936:940, 1/0/1026:1034 | No text annotation Not in a motif group | ||
| IL_1YJW_032 | 1/0/942:944, 1/0/1023:1024 | No text annotation Not in a motif group | ||
| IL_1YJW_033 | 1/0/952:956, 1/0/1011:1015 | No text annotation Not in a motif group | ||
| IL_1YJW_034 | 1/0/956:957, 1/0/1009:1011 | No text annotation Not in a motif group | ||
| IL_1YJW_035 | 1/0/958:964, 1/0/1004:1008 | No text annotation Not in a motif group | ||
| IL_1YJW_036 | 1/0/965:968, 1/0/1000:1003 | No text annotation Not in a motif group | ||
| IL_1YJW_037 | 1/0/1095:1099, 1/0/1257:1261 | No text annotation Not in a motif group | ||
| IL_1YJW_038 | 1/0/1101:1108, 1/0/1254:1255 | No text annotation Not in a motif group | ||
| IL_1YJW_039 | 1/0/1108:1110, 1/0/1253:1254 | No text annotation Not in a motif group | ||
| IL_1YJW_040 | 1/0/1115:1121, 1/0/1243:1248 | No text annotation Not in a motif group | ||
| IL_1YJW_041 | 1/0/1136:1138, 1/0/1225:1226 | No text annotation Not in a motif group | ||
| IL_1YJW_042 | 1/0/1147:1155, 1/0/1212:1216 | No text annotation Not in a motif group | ||
| IL_1YJW_043 | 1/0/1163:1167, 1/0/1179:1183 | No text annotation Not in a motif group | ||
| IL_1YJW_044 | 1/0/1269:1270, 1/0/1286:1289 | No text annotation Not in a motif group | ||
| IL_1YJW_045 | 1/0/1301:1303, 1/0/1351:1354 | No text annotation Not in a motif group | ||
| IL_1YJW_046 | 1/0/1303:1305, 1/0/1349:1351 | No text annotation Not in a motif group | ||
| IL_1YJW_047 | 1/0/1312:1319, 1/0/1338:1342 | No text annotation Not in a motif group | ||
| IL_1YJW_048 | 1/0/1367:1373, 1/0/2052:2057 | No text annotation Not in a motif group | ||
| IL_1YJW_049 | 1/0/1416:1419, 1/0/1678:1679 | No text annotation Not in a motif group | ||
| IL_1YJW_050 | 1/0/1425:1429, 1/0/1437:1439 | No text annotation Not in a motif group | ||
| IL_1YJW_051 | 1/0/1456:1460, 1/0/1483:1489 | No text annotation Not in a motif group | ||
| IL_1YJW_052 | 1/0/1465:1467, 1/0/1475:1478 | No text annotation Not in a motif group | ||
| IL_1YJW_053 | 1/0/1521:1529, 1/0/1662:1665 | No text annotation Not in a motif group | ||
| IL_1YJW_054 | 1/0/1542:1546, 1/0/1639:1643 | No text annotation Not in a motif group | ||
| IL_1YJW_055 | 1/0/1570:1574, 1/0/1622:1627 | No text annotation Not in a motif group | ||
| IL_1YJW_056 | 1/0/1578:1583, 1/0/1612:1618 | No text annotation Not in a motif group | ||
| IL_1YJW_057 | 1/0/1587:1592, 1/0/1602:1608 | No text annotation Not in a motif group | ||
| IL_1YJW_058 | 1/0/1728:1734, 1/0/2045:2047 | No text annotation Not in a motif group | ||
| IL_1YJW_059 | 1/0/1741:1743, 1/0/2036:2038 | No text annotation Not in a motif group | ||
| IL_1YJW_060 | 1/0/1744:1747, 1/0/2034:2035 | No text annotation Not in a motif group | ||
| IL_1YJW_061 | 1/0/1747:1752, 1/0/2031:2034 | No text annotation Not in a motif group | ||
| IL_1YJW_062 | 1/0/1764:1769, 1/0/1774:1780 | No text annotation Not in a motif group | ||
| IL_1YJW_063 | 1/0/1826:1827, 1/0/2021:2023 | No text annotation Not in a motif group | ||
| IL_1YJW_064 | 1/0/1854:1860, 1/0/1869:1877 | No text annotation Not in a motif group | ||
| IL_1YJW_065 | 1/0/1893:1896, 1/0/1943:1944 | No text annotation Not in a motif group | ||
| IL_1YJW_066 | 1/0/1897:1898, 1/0/1939:1942 | No text annotation Not in a motif group | ||
| IL_1YJW_067 | 1/0/1902:1905, 1/0/1934:1935 | No text annotation Not in a motif group | ||
| IL_1YJW_068 | 1/0/1907:1913, 1/0/1926:1932 | No text annotation Not in a motif group | ||
| IL_1YJW_069 | 1/0/1974:1975, 1/0/2005:2008 | No text annotation Not in a motif group | ||
| IL_1YJW_070 | 1/0/1975:1986, 1/0/2002:2005 | No text annotation Not in a motif group | ||
| IL_1YJW_071 | 1/0/2090:2093, 1/0/2652:2654 | No text annotation Not in a motif group | ||
| IL_1YJW_072 | 1/0/2095:2097, 1/0/2647:2650 | No text annotation Not in a motif group | ||
| IL_1YJW_073 | 1/0/2108:2110, 1/0/2477:2478 | No text annotation Not in a motif group | ||
| IL_1YJW_074 | 1/0/2111:2112, 1/0/2473:2476 | No text annotation Not in a motif group | ||
| IL_1YJW_075 | 1/0/2122:2124, 1/0/2269:2272 | No text annotation Not in a motif group | ||
| IL_1YJW_076 | 1/0/2279:2280, 1/0/2290:2292 | No text annotation Not in a motif group | ||
| IL_1YJW_077 | 1/0/2331:2333, 1/0/2351:2355 | No text annotation Not in a motif group | ||
| IL_1YJW_078 | 1/0/2436:2438, 1/0/2454:2455 | No text annotation Not in a motif group | ||
| IL_1YJW_079 | 1/0/2489:2490, 1/0/2531:2533 | No text annotation Not in a motif group | ||
| IL_1YJW_080 | 1/0/2492:2494, 1/0/2528:2529 | No text annotation Not in a motif group | ||
| IL_1YJW_081 | 1/0/2494:2496, 1/0/2524:2528 | No text annotation Not in a motif group | ||
| IL_1YJW_082 | 1/0/2501:2505, 1/0/2515:2519 | No text annotation Not in a motif group | ||
| IL_1YJW_083 | 1/0/2542:2543, 1/0/2615:2617 | No text annotation Not in a motif group | ||
| IL_1YJW_084 | 1/0/2545:2547, 1/0/2609:2613 | No text annotation Not in a motif group | ||
| IL_1YJW_085 | 1/0/2547:2548, 1/0/2606:2609 | No text annotation Not in a motif group | ||
| IL_1YJW_086 | 1/0/2557:2558, 1/0/2575:2578 | No text annotation Not in a motif group | ||
| IL_1YJW_087 | 1/0/2626:2627, 1/0/2636:2638 | No text annotation Not in a motif group | ||
| IL_1YJW_088 | 1/0/2672:2676, 1/0/2809:2817 | No text annotation Not in a motif group | ||
| IL_1YJW_089 | 1/0/2689:2695, 1/0/2700:2705 | No text annotation Not in a motif group | ||
| IL_1YJW_090 | 1/0/2717:2721, 1/0/2761:2763 | No text annotation Not in a motif group | ||
| IL_1YJW_091 | 1/0/2724:2728, 1/0/2754:2758 | No text annotation Not in a motif group | ||
| IL_1YJW_092 | 1/0/2732:2733, 1/0/2746:2750 | No text annotation Not in a motif group | ||
| IL_1YJW_093 | 1/0/2772:2777, 1/0/2797:2802 | No text annotation Not in a motif group | ||
| IL_1YJW_094 | 1/0/2855:2857, 1/0/2900:2903 | No text annotation Not in a motif group | ||
| IL_1YJW_095 | 1/0/2860:2861, 1/0/2895:2897 | No text annotation Not in a motif group | ||
| IL_1YJW_096 | 1/0/2864:2869, 1/0/2888:2892 | No text annotation Not in a motif group | ||
| IL_1YJW_097 | 1/0/2873:2876, 1/0/2881:2884 | No text annotation Not in a motif group | ||
| IL_1YJW_098 | 1/9/15:16, 1/9/64:66 | No text annotation Not in a motif group | ||
| IL_1YJW_099 | 1/9/21:28, 1/9/54:59 | No text annotation Not in a motif group | ||
| IL_1YJW_100 | 1/9/29:30, 1/9/50:53 | No text annotation Not in a motif group | ||
| IL_1YJW_101 | 1/9/33:37, 1/9/43:47 | No text annotation Not in a motif group | ||
| IL_1YJW_102 | 1/9/72:74, 1/9/107:109 | No text annotation Not in a motif group | ||
| IL_1YJW_103 | 1/9/74:81, 1/9/101:107 | No text annotation Not in a motif group | ||
| IL_1YJW_104 | 1/9/86:88, 1/9/95:96 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_1YJW_001 | 1/0/240:244, 1/0/267:273, 1/0/377:379 | No text annotation Not in a motif group | ||
| J3_1YJW_002 | 1/0/774:780, 1/0/866:868, 1/0/884:887 | No text annotation Not in a motif group | ||
| J3_1YJW_003 | 1/0/789:791, 1/0/823:828, 1/0/853:856 | No text annotation Not in a motif group | ||
| J3_1YJW_004 | 1/0/1159:1161, 1/0/1185:1194, 1/0/1205:1208 | No text annotation Not in a motif group | ||
| J3_1YJW_005 | 1/0/1404:1409, 1/0/1700:1703, 1/0/1715:1718 | No text annotation Not in a motif group | ||
| J3_1YJW_006 | 1/0/1412:1415, 1/0/1680:1686, 1/0/1695:1697 | No text annotation Not in a motif group | ||
| J3_1YJW_007 | 1/0/2131:2134, 1/0/2241:2245, 1/0/2256:2262 | No text annotation Not in a motif group | ||
| J3_1YJW_008 | 1/0/2329:2331, 1/0/2355:2357, 1/0/2366:2371 | No text annotation Not in a motif group | ||
| J3_1YJW_009 | 1/0/2552:2555, 1/0/2580:2583, 1/0/2595:2602 | No text annotation Not in a motif group | ||
| J3_1YJW_010 | 1/0/2830:2832, 1/0/2848:2853, 1/0/2905:2910 | No text annotation Not in a motif group | ||
| J3_1YJW_011 | 1/9/9:14, 1/9/67:71, 1/9/110:114 | No text annotation Not in a motif group | ||
| J3_1YJW_012 | 1/0/27:28, 1/0/480:487, 1/0/515:516 | No text annotation Not in a motif group | ||
| J3_1YJW_013 | 1/0/52:53, 1/0/66:72, 1/0/105:109 | No text annotation Not in a motif group | ||
| J3_1YJW_014 | 1/0/1450:1455, 1/0/1490:1494, 1/0/1511:1512 | No text annotation Not in a motif group | ||
| J3_1YJW_015 | 1/0/1531:1535, 1/0/1650:1651, 1/0/1655:1660 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
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