IL_1Z58_053

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1Z58_053 not in the Motif Atlas

Homologous match to IL_4WF9_051

Geometric discrepancy: 0.1191

The information below is about IL_4WF9_051

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.4

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

8

Unit IDs

1Z58|1|2|C|1364
1Z58|1|2|U|1365
1Z58|1|2|A|1366
1Z58|1|2|A|1367
1Z58|1|2|G|1368
*
1Z58|1|2|C|1389
1Z58|1|2|G|1390
1Z58|1|2|A|1391
1Z58|1|2|U|1392
1Z58|1|2|G|1393

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains