IL_1Z58_132

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

ACAA*UUAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1Z58_132 not in the Motif Atlas

Geometric match to IL_4V9F_036

Geometric discrepancy: 0.3512

The information below is about IL_4V9F_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02203.1

Basepair signature

cWW-cSW-cWW-cWW

Number of instances in this motif group

1

Unit IDs

1Z58|1|2|A|883
1Z58|1|2|C|884
1Z58|1|2|A|885
1Z58|1|2|A|886
*
1Z58|1|2|U|916
1Z58|1|2|U|917
1Z58|1|2|A|918
1Z58|1|2|U|919

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains