IL_1Z58_145

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

AUUGGGAUU*GAUUUCUAACCUGAAAAAUCACUUUCGGGGACCGU

Length

44 nucleotides

Bulged bases

1Z58|1|2|U|2075, 1Z58|1|2|A|2189, 1Z58|1|2|A|2190, 1Z58|1|2|A|2191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|A|2073
1Z58|1|2|U|2074
1Z58|1|2|U|2075
1Z58|1|2|G|2076
1Z58|1|2|G|2077
1Z58|1|2|G|2078
1Z58|1|2|A|2079
1Z58|1|2|U|2080
1Z58|1|2|U|2081
*
1Z58|1|2|G|2174
1Z58|1|2|A|2175
1Z58|1|2|U|2176
1Z58|1|2|U|2177
1Z58|1|2|U|2178
1Z58|1|2|C|2179
1Z58|1|2|U|2180
1Z58|1|2|A|2181
1Z58|1|2|A|2182
1Z58|1|2|C|2183
1Z58|1|2|C|2184
1Z58|1|2|U|2185
1Z58|1|2|G|2186
1Z58|1|2|A|2187
1Z58|1|2|A|2188
1Z58|1|2|A|2189
1Z58|1|2|A|2190
1Z58|1|2|A|2191
1Z58|1|2|U|2192
1Z58|1|2|C|2193
1Z58|1|2|A|2194
1Z58|1|2|C|2195
1Z58|1|2|U|2196
1Z58|1|2|U|2197
1Z58|1|2|U|2198
1Z58|1|2|C|2199
1Z58|1|2|G|2200
1Z58|1|2|G|2201
1Z58|1|2|G|2202
1Z58|1|2|G|2203
1Z58|1|2|A|2204
1Z58|1|2|C|2205
1Z58|1|2|C|2206
1Z58|1|2|G|2207
1Z58|1|2|U|2208

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains