IL_1Z58_150

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GUGGAUG*CUGAAAC

Length

14 nucleotides

Bulged bases

1Z58|1|2|A|525

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1Z58_150 not in the Motif Atlas

Homologous match to IL_4WF9_001

Geometric discrepancy: 0.2342

The information below is about IL_4WF9_001

Detailed Annotation

Triple sheared with non-canonical cWW

Broad Annotation

Triple sheared

Motif group

IL_22311.2

Basepair signature

cWW-cWW-tSH-tHS-tHS-L-R-cWW

Number of instances in this motif group

11

Unit IDs

1Z58|1|2|G|24
1Z58|1|2|U|25
1Z58|1|2|G|26
1Z58|1|2|G|27
1Z58|1|2|A|28
1Z58|1|2|U|29
1Z58|1|2|G|30
*
1Z58|1|2|C|520
1Z58|1|2|U|521
1Z58|1|2|G|522
1Z58|1|2|A|523
1Z58|1|2|A|524
1Z58|1|2|A|525
1Z58|1|2|C|526

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains