IL_1ZHO_002
3D structure
- PDB id
- 1ZHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of a ribosomal protein L1 in complex with mRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAG*CGCGAAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1ZHO_002 not in the Motif Atlas
- Geometric match to IL_2HW8_001
- Geometric discrepancy: 0.0688
- The information below is about IL_2HW8_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_24134.1
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
1ZHO|1|D|G|10
1ZHO|1|D|G|11
1ZHO|1|D|A|12
1ZHO|1|D|G|13
*
1ZHO|1|D|C|22
1ZHO|1|D|G|23
1ZHO|1|D|C|24
1ZHO|1|D|G|25
1ZHO|1|D|A|26
1ZHO|1|D|A|27
1ZHO|1|D|A|28
1ZHO|1|D|C|29
Current chains
- Chain D
- mRNA
Nearby chains
- Chain C
- 50S ribosomal protein L1
Coloring options: