IL_1ZHO_004

3D structure

PDB id

1ZHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of a ribosomal protein L1 in complex with mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGAG*CGCGAAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90460.1

Basepair signature

cWW-tSH-tSS-tSS-R-R-R-R-cWW

Number of instances in this motif group

3

Unit IDs

1ZHO|1|H|G|10
1ZHO|1|H|G|11
1ZHO|1|H|A|12
1ZHO|1|H|G|13
*
1ZHO|1|H|C|22
1ZHO|1|H|G|23
1ZHO|1|H|C|24
1ZHO|1|H|G|25
1ZHO|1|H|A|26
1ZHO|1|H|A|27
1ZHO|1|H|A|28
1ZHO|1|H|C|29

Current chains

Chain H

mRNA

Nearby chains

Chain A

50S ribosomal protein L1

Chain G

50S ribosomal protein L1