#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 7 8 9 10 11 121-122-113-64-54-115-11
1 IL_1U63_0031U630.46590Kink-turnD49 NT FRAGMENT OF MRNA FOR L1G10G11A12G13*C33G34A35G36A37A38A39C40cWWtSHntSscWWtsS
2 IL_2VPL_0012VPL0.00000Kink-turnBFRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITEG10G11A12G13*C33G34A35G36A37A38A39C40cWWtSHntSscWWtsS
3 IL_1ZHO_0041ZHO0.16900HmRNAG10G11A12G13*C22G23C24G25A26A27A28C29cWWtSHntSscWWtsScsS

3D structures

Complete motif including flanking bases
SequenceCounts
GGAG*CGAGAAAC2
GGAG*CGCGAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
GA*GAGAAA2
GA*GCGAAA1

Release history

Release2.0
Date2017-04-24
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Kink-turn (2)
  • (1)
  • Basepair signature
    cWW-tSH-tSS-tSS-R-R-R-R-cWW
    Heat map statistics
    Min 0.17 | Avg 0.25 | Max 0.51
    Help

    Coloring options:

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