IL_22TU_061
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGUC*GUC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_22TU_061 not in the Motif Atlas
- Homologous match to IL_8GLP_060
- Geometric discrepancy: 0.07
- The information below is about IL_8GLP_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36931.5
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 29
Unit IDs
22TU|1|L5|G|1586
22TU|1|L5|G|1587
22TU|1|L5|U|1588
22TU|1|L5|C|1589
*
22TU|1|L5|G|1605
22TU|1|L5|U|1606
22TU|1|L5|C|1607
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain Lj
- 60S ribosomal protein L37
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