IL_22TU_117

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UCAAAGU*AAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|U|3715
22TU|1|L5|C|3716
22TU|1|L5|A|3717
22TU|1|L5|A|3718
22TU|1|L5|A|3719
22TU|1|L5|G|3720
22TU|1|L5|U|3721
*
22TU|1|L5|A|3732
22TU|1|L5|A|3733
22TU|1|L5|U|3734
22TU|1|L5|G|3735
22TU|1|L5|A|3736
22TU|1|L5|A|3737
22TU|1|L5|G|3738

Current chains

Chain L5

28S rRNA

Nearby chains

Chain C4

Transfer RNA; tRNA

Chain LA

60S ribosomal protein L8

Chain Li

60S ribosomal protein L36