IL_22TU_146

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUCAGUAC*GGAACCG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|C|4596
22TU|1|L5|U|4597
22TU|1|L5|C|4598
22TU|1|L5|A|4599
22TU|1|L5|G|4600
22TU|1|L5|U|4601
22TU|1|L5|A|4602
22TU|1|L5|C|4603
*
22TU|1|L5|G|4608
22TU|1|L5|G|4609
22TU|1|L5|A|4610
22TU|1|L5|A|4611
22TU|1|L5|C|4612
22TU|1|L5|C|4613
22TU|1|L5|G|4614

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LH

60S ribosomal protein L9

Chain LV

60S ribosomal protein L23

Chain Lm

Ubiquitin-60S ribosomal protein L40