IL_22TU_160
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUCG*CCUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_22TU_160 not in the Motif Atlas
- Homologous match to IL_9H3G_140
- Geometric discrepancy: 0.143
- The information below is about IL_9H3G_140
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 43
Unit IDs
22TU|1|L5|U|4972
22TU|1|L5|U|4973
22TU|1|L5|C|4974
22TU|1|L5|G|4975
*
22TU|1|L5|C|4983
22TU|1|L5|C|4984
22TU|1|L5|U|4985
22TU|1|L5|G|4986
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LP
- 60S ribosomal protein L17
- Chain Ld
- 60S ribosomal protein L31
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